no r2u (#1057) #102
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| name: Extended Tests (Optional) | |
| on: | |
| push: | |
| branches: | |
| - master | |
| jobs: | |
| test: | |
| name: Tests Core | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-latest"] | |
| python-version: ["3.12"] | |
| pytest_opts: ["--workers 4 --tests-per-worker 1"] | |
| steps: | |
| - name: Checkout source | |
| uses: actions/checkout@v4 | |
| - name: Setup python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| architecture: x64 | |
| - uses: prefix-dev/[email protected] | |
| with: | |
| pixi-version: v0.41.4 | |
| cache: true | |
| - name: Set numba parallel flags | |
| run: echo "NUMBA_NUM_THREADS=1" >> $GITHUB_ENV | |
| - name: Setup r2u | |
| uses: eddelbuettel/github-actions/r2u-setup@master | |
| - name: Print R version | |
| run: Rscript -e 'R.version' | |
| - name: Install R packages | |
| run: | | |
| R_LIB_PATH="${{ github.workspace }}/.pixi/envs/dev/lib/R/library" | |
| mkdir -p $R_LIB_PATH | |
| Rscript -e ".libPaths('$R_LIB_PATH'); install.packages(c('did2s', 'wildrwolf', 'ivDiag'), lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library', repos = c('https://cran.rstudio.com', 'https://s3alfisc.r-universe.dev'))" | |
| Rscript -e ".libPaths('$R_LIB_PATH'); install.packages('ritest', lib='/home/runner/work/pyfixest/pyfixest/.pixi/envs/dev/lib/R/library', repos = c('https://grantmcdermott.r-universe.dev'))" | |
| - name: Compile Rust extension (no wheel) | |
| run: | | |
| pixi r maturin-develop | |
| - name: Run long tests with coverage | |
| run: pixi run tests-extended | |
| - name: Upload coverage to Codecov (partial) | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| files: coverage.xml | |
| flags: tests-extended | |
| partial: true |