Getting Started

git clone https://github.com/ratschlab/MinknoApiSimulator.git
cd MinknoApiSimulator/certs
./generate.sh
cd ..

# create or activate virtual env if required and then..
pip install .

# Run the server and the client
mksimserver --certs ./certs --input <input file or directory> --input <input file or directory> &
mksimclient ./certs

Run mksimserver --help for options.

TODO

• Logging
• Graceful exit
• Remove version hardcoding from manager and instance services (currently hardcoded to "6.0.0")
• Remove hardcoded flowcell name from manager service (currently hardcoded to "MN12345")
• Remove hardcoded run_id from protocol (currently hardcoded to "test_run")
• Fix acquisition progress
• Optional certs directory for pip install